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Stochastic theory of protein synthesis and polysome: ribosome profile on a single mRNA transcript
ribosome traffic, master equation, extremum current hypothesis, distance-headway,TASEP.
2011/8/29
The process of polymerizing a protein by a ribosome, using a messenger RNA (mRNA) as the corresponding template, is called translation. Ribosome may be regarded as a molecular motor for which the mRNA...
Stochastic theory of large-scale enzyme-reaction networks: Finite copy number corrections to rate equation models
Stochastic theory large-scale enzyme-reaction networks Finite copy number corrections
2011/8/18
Abstract: Chemical reactions inside cells occur in compartment volumes in the range of atto- to femtolitres. Physiological concentrations realized in such small volumes imply low copy numbers of inter...
The Bolus Velocity in the Stochastic Theory of Ocean Turbulent Tracer Transport
Bolus Velocity Stochastic Theory Ocean Turbulent
2008/7/21
A stochastic theory of tracer transport in compressible turbulence has recently been developed and then applied to the ocean case because stratified flow in isopycnal coordinates is analogous to compr...
The Primitive Equations in the Stochastic Theory of Adiabatic Stratified Turbulence
Primitive Equations Stochastic Theory Adiabatic Stratified Turbulence
2008/7/21
The stochastic theory of compressible turbulent fluid transport recently developed by Dukowicz and Smith is applied to the ensemble-mean primitive equations (PEs) for adiabatic stratified flow. The th...